PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_35976
Common NameKK1_035480
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 234aa    MW: 25330.2 Da    PI: 5.2758
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_35976genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-182979155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  C.cajan_35976 29 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 79
                   59*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.43E-192987No hitNo description
SMARTSM003807.6E-353093IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-303088IPR001471AP2/ERF domain
PROSITE profilePS5103221.8383087IPR001471AP2/ERF domain
PfamPF008472.0E-113079IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-203088IPR016177DNA-binding domain
PRINTSPR003675.5E-93142IPR001471AP2/ERF domain
PRINTSPR003675.5E-95369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MVKPENKIHT EASKPMRPSS SDTNINTKKK YKGVRMRSWG SWVSEIRAPN QKTRIWLGSY  60
STAEAAARAY DAALLCLKGS SANLNFPSTS SHYINIPQDT AMSPKSIQRV AAAAANSFVD  120
NANANAIPIP TTPPSSLPAS TSSSSLVSSP SIASSSSSSS PSEQIDDDVS LLSPFFGDQA  180
NESMAMMEPW YGLEGLQSPK YVDQMLNGAF FDIDSTHLLG DLYEESDIRL WSFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-142987160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A3e-1430871472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_35976
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150366e-87AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238889.11e-171ethylene-responsive transcription factor ERF014
TrEMBLA0A151RKQ91e-170A0A151RKQ9_CAJCA; Ethylene-responsive transcription factor ERF012 family
STRINGXP_007141071.14e-96(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.11e-32ERF family protein