PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_35885
Common NameKK1_032905
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 249aa    MW: 27954.1 Da    PI: 8.9246
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_35885genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08145185954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  C.cajan_35885 145 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 185
                    699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434136185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.5E-14137195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-14140195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14142191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-6146185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.11E-6159190No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MDVDIVKTSA CDTTNMDMMA MMMQMEKFPD FCDPFYTLYQ ETDLLSSGSV STVFNSITPP  60
TLTDPPQSNV NFFNNNNNNN VIQQQHMTTT LPSHDTLEKK NSMAAMREMI FRIAVMQPIH  120
IDPESIKPPK RRNVKISKDP QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAIH  180
YVKFLKKQVQ TLEQAGANRP PHNNNAVPIG GVVSFPLGIS NSNANYSSLF MKGCQPCQML  240
GSTSKQLLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0977113e-95BT097711.1 Soybean clone JCVI-FLGm-22O4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014507358.11e-102PREDICTED: transcription factor HEC2
SwissprotQ9FHA72e-50HEC1_ARATH; Transcription factor HEC1
TrEMBLA0A151RSM50.0A0A151RSM5_CAJCA; Transcription factor HEC1
STRINGGLYMA11G05920.13e-81(Glycine max)
STRINGGLYMA05G19920.24e-81(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.18e-44bHLH family protein