PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33811
Common NameKK1_036737
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 239aa    MW: 27697.4 Da    PI: 5.1232
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33811genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-07173216755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    ++ r RR++i  + ++L +l+P       +K++ ae+L  A +Y+++Lq
  C.cajan_33811 173 IAARERRRKITVKTQQLGKLVPGG-----PKMNTAEMLHAAAKYVNYLQ 216
                    56799*****************95.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.76E-11164224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.42E-7164219No hitNo description
PROSITE profilePS5088811.642166215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-8172221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.9E-10173223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-5174216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MALRTYFNRE TLQFPISKTN TFHESMPEEV SAPNLNHFFP YSDESFFLSN PLFNNYFDPT  60
GDFVFPPEIY PPYDPIIPLT RHDIFPTHED YNLLPCPKSQ KYNYEPEPQE FITPSVPSTF  120
LEGFFMPYDN CSSLQGEEQQ HELFYNVPQH DTCVDLPWCE KKDKERNISP QSIAARERRR  180
KITVKTQQLG KLVPGGPKMN TAEMLHAAAK YVNYLQAQVG MLELMKSLEV IVMICHGTA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-50AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006586395.11e-108PREDICTED: transcription factor bHLH52-like
TrEMBLA0A151RH331e-180A0A151RH33_CAJCA; Transcription factor bHLH52
STRINGGLYMA08G17747.11e-108(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.13e-21bHLH family protein