PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33750
Common NameKK1_034219
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 193aa    MW: 20584 Da    PI: 9.487
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33750genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-1865115155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a+++a+++++g
  C.cajan_33750  65 CNYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFSTAIGAALAYDEAARAMYG 115
                    56*****999.**********8...2.359***********************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-1265115IPR001471AP2/ERF domain
CDDcd000185.52E-3065124No hitNo description
SMARTSM003802.8E-3766129IPR001471AP2/ERF domain
PROSITE profilePS5103221.35166123IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-2066123IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-3166124IPR001471AP2/ERF domain
PRINTSPR003673.5E-96778IPR001471AP2/ERF domain
PRINTSPR003673.5E-989105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MHMLAKAHNK GDGSKSLAKI LARWKEYNAQ LDSCNDADKP VRKVPAKGSK KGCMKGKGGP  60
ENSRCNYRGV RQRTWGKWVA EIREPNRGNR LWLGTFSTAI GAALAYDEAA RAMYGSCARL  120
NFPNVSVSSF SEESSKDSPV ANRSGSSMAV SANTGSMISP SNSGGGIEED IDLEPISLSL  180
SVKHENGEGE SGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-1866123563ATERF1
3gcc_A3e-1866123563ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and abscisic acid-inducible transcription. {ECO:0000269|PubMed:11798174}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33750
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By high-salt stress and abscisic acid (ABA) treatment. {ECO:0000269|PubMed:11798174}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0923140.0BT092314.1 Soybean clone JCVI-FLGm-10J23 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237819.11e-140putative dehydration-responsive element-binding protein 2H
SwissprotQ8LFR27e-50DRE2C_ARATH; Dehydration-responsive element-binding protein 2C
TrEMBLA0A151RP401e-139A0A151RP40_CAJCA; Dehydration-responsive element-binding protein 2C
STRINGGLYMA12G32400.11e-103(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117534106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-39DRE-binding protein 2A
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Sazegari S,Niazi A,Ahmadi FS
    A study on the regulatory network with promoter analysis for Arabidopsis DREB-genes.
    Bioinformation, 2015. 11(2): p. 101-6
    [PMID:25848171]
  3. Huang KC,Lin WC,Cheng WH
    Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.
    BMC Plant Biol., 2018. 18(1): p. 40
    [PMID:29490615]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]