PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32656
Common NameKK1_030586
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 202aa    MW: 22374.9 Da    PI: 8.1435
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32656genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.3e-12143754
                   HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  C.cajan_32656  1 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 43
                   58*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF000101.6E-9143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.24E-16162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.942143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.68E-12147No hitNo description
SMARTSM003534.8E-12149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-15155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL KELLHRINDL HIELESSSPG  60
SSLPPSASFH PVTPTPSTVP PSASFHPVTP TPPTLPCRVK EEPCPTSLPC PNSQSAKVEV  120
RVREGRAVNI HMLCARRPGL LLSTMRALDN LGLDVQQAAV ISCFNGFALD VFKAEQCRED  180
QDVLPEQIKA VLLDTADFHG MM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
129ERRRRKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006485105.11e-103PREDICTED: transcription factor ICE1-like
SwissprotQ9LSE21e-104ICE1_ARATH; Transcription factor ICE1
TrEMBLA0A151RYZ21e-147A0A151RYZ2_CAJCA; Transcription factor ICE1
STRINGGLYMA16G26291.11e-103(Glycine max)
STRINGfgenesh2_kg.5__441__AT3G26744.21e-101(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.47e-98bHLH family protein