PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_31085
Common NameKK1_032888
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 279aa    MW: 31233.2 Da    PI: 6.7129
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_31085genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-1282126755
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP+ +      K +K++++ +Av YIk+Lq
  C.cajan_31085  82 WTERERRKKMRNMFANLHALLPHiP-----SKADKSTVVDEAVSYIKNLQ 126
                    57*********************88.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.68175125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-1577138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.32E-1278130No hitNo description
Gene3DG3DSA:4.10.280.101.2E-1579139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-980126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-883131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MALALGNQGP HDITFLWEDH SWDPTNSDNS SESKEKAKPL NQQKEEKDET LVNKKRNQVQ  60
RSITSGEGKD EKCQSDHEVH IWTERERRKK MRNMFANLHA LLPHIPSKAD KSTVVDEAVS  120
YIKNLQQTLE KLEKQKQERV QYVSTFGCDS SMFVTHQGSS NNPNAMMGTS NSALSFPGQQ  180
QPIAFEKTWA ASNIVLNICG DEAQFTICAA RKPGLLTSIA FVLDKYKIEV ICANISSIGN  240
GNGCMIQAHG KRSSNEFLDA NSVEEIYKQV AGEIMLWIA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574890.11e-150PREDICTED: transcription factor bHLH95
TrEMBLA0A151RSS40.0A0A151RSS4_CAJCA; Transcription factor bHLH95
STRINGGLYMA02G11500.21e-149(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-43bHLH family protein