PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28596
Common NameKK1_028536
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 337aa    MW: 37985.5 Da    PI: 7.5837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28596genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.42.9e-09163210455
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  C.cajan_28596 163 SHSLAERVRREKISERMKVLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 210
                    8*************************9....555*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.97E-17157226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.06E-11157214No hitNo description
Gene3DG3DSA:4.10.280.101.8E-16159222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.79159209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-6163210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-10165215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MAAFSYQYHP FLVDPAFFPN MHTPPSPPHF HFPQETSPNV TNQETSCVDQ SSKITISDNE  60
PSVTKNLSPQ SSMVVDKLET GEQVTQKVTP VQKKRRTRNG SSLSNPQSKD IATEGRNKKQ  120
RKSNCGVKEE EKAKEEKKEK KCAEEPPTGY IHVRARRGQA TDSHSLAERV RREKISERMK  180
VLQRLVPGCD KVTGKALMLD EIINYVQSLQ NQVEFLSMKL ASVSPMFYDL TTDLDSLFVR  240
PEKLNSMASP SPLPSVSHCN SPNQATTFAD TTTMNPTNIF HTASDYLLDN SASLFLQGQR  300
SNVFSEEDTG SQFWDAEDQR QKFLHPYGFS NNLCSFH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312510.0KT031251.1 Glycine max clone HN_CCL_22 bHLH transcription factor (Glyma04g37690.1_like1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007137888.10.0hypothetical protein PHAVU_009G164300g
TrEMBLA0A151S4F20.0A0A151S4F2_CAJCA; Transcription factor bHLH137 family
STRINGGLYMA06G17420.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-58bHLH family protein