PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25563
Common NameKK1_026319
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 320aa    MW: 35746.1 Da    PI: 5.089
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25563genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.4e-11137180755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    + ErrRR r+++++  Lr+l+P+      +K++Ka+i   Av Y+++Lq
  C.cajan_25563 137 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIIGDAVSYVHELQ 180
                    78*********************7.....7*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.631130179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-17131204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.90E-13132184No hitNo description
Gene3DG3DSA:4.10.280.102.1E-16132195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.1E-15136185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-8136180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MNAMDAHQNT LTYINDFELY DFVHNPNFDQ FINLIRGEDE DANCDFGSDL INDCFVNNQL  60
LSCPTNPFDQ NNNNAVSVYD PSSTFSSFSC FDGEVKGHGE EEHDGEHSSE TTTTTTMTTK  120
NGDAKPKLKT DRSKTLISER RRRGRMKEKL YALRSLVPNI TKMDKASIIG DAVSYVHELQ  180
AQARKLKAEV AGLEASLLMS ENYQGSINNP KNVQVARNSH PICKKIMQVD MFQVEERGYY  240
AKIVCNKGEG MAASLYRALE SLAGFNVQNS NLATVCESYL LTFTLNVKGS EPEINLPNLK  300
LWVTGALLNQ GFEFVTSFPA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007150142.11e-180hypothetical protein PHAVU_005G130500g
RefseqXP_007150143.11e-180hypothetical protein PHAVU_005G130500g
SwissprotQ0V7X41e-107FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLA0A151SAP00.0A0A151SAP0_CAJCA; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
STRINGGLYMA12G30240.11e-176(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36793358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-98FER-like regulator of iron uptake