PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25409
Common NameKK1_026781
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 210aa    MW: 23287.2 Da    PI: 7.3712
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25409genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-053557123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C+ C k F++   L  H+++H
  C.cajan_25409 35 YTCSFCRKEFKSAQALGGHMNVH 57
                   9********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.05E-73261No hitNo description
Gene3DG3DSA:3.30.160.603.5E-43359IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.3443562IPR007087Zinc finger, C2H2
PfamPF139127.1E-63558IPR007087Zinc finger, C2H2
SMARTSM003550.0033557IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803757IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008361Biological Processregulation of cell size
GO:0009755Biological Processhormone-mediated signaling pathway
GO:0010093Biological Processspecification of floral organ identity
GO:0010160Biological Processformation of organ boundary
GO:0042127Biological Processregulation of cell proliferation
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MAKECWECSS NNNNNSHSNA DQDYVNGFPW PPRSYTCSFC RKEFKSAQAL GGHMNVHRRD  60
RARLRQSPPT DQAQQGPMLN LNLDPSTNPN NSTSSLSMLP SSSSTLKPVT CTLPLFVSPT  120
PPSPSSELKR SWVVVDGILL NPFSTKTPEQ SKSKIPESLP AGVGEYDHAF AREDGCKVLK  180
KGEILRMDLE IGLPRDYDLD LELRLGTTYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1njq_A6e-133057229superman protein
2l1o_A6e-133057229Transcriptional regulator SUPERMAN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25409
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020231407.11e-155transcriptional regulator SUPERMAN
TrEMBLA0A151S9721e-154A0A151S972_CAJCA; Transcriptional regulator SUPERMAN
STRINGXP_007149575.11e-107(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28433171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-36C2H2 family protein