PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_24887
Common NameKK1_024985
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 194aa    MW: 21972.2 Da    PI: 6.5289
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_24887genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.11.2e-111358454
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    h ++Er RR++i + f  L  l+P +     kK++K+++L +A++Y+++L
  C.cajan_24887 13 DHIIAERMRREKISQQFIALSALIPDL-----KKMDKVSVLGEAIRYVREL 58
                   5999***********************.....9****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.583958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-161273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-151370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.44E-91463No hitNo description
PfamPF000104.9E-91458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.2E-131564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MSSLATTSHH TKDHIIAERM RREKISQQFI ALSALIPDLK KMDKVSVLGE AIRYVRELKG  60
QVKLLEEQSK RKSEDSLVFV KRPQDEDVSD TSSNSCEFGN FDDSSKTNLS LPEVEARVSK  120
KNVLIRILCK KENVVLVNIF REIEKLHLSV ISSSALSFGS SVLDTTIVAE MEDEFNMNVE  180
ELARNLRVGL MQFV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003549988.11e-111PREDICTED: transcription factor bHLH18-like
TrEMBLA0A151SEA21e-138A0A151SEA2_CAJCA; Transcription factor bHLH25
STRINGGLYMA17G16730.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-40bHLH family protein