PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22803
Common NameKK1_023476
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 218aa    MW: 24530 Da    PI: 5.8359
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22803genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-0963110454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++  rE+ RR+r+N++f  L  +l +    +  + +K +iL  A++ +++L
  C.cajan_22803  63 SKACREKLRRERLNERFCDLSAILEPG---RPVRTDKPAILDDAIRVLSQL 110
                    6778**********************8...89*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.00459110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.10E-663113No hitNo description
PfamPF000101.6E-663110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-1165137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-665116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-966132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MDSLEDTACW DFLDYSFIDQ APPDFLWSNH SVSTEIDIPG DAVACPENTK KRGRTDSCFK  60
AGSKACREKL RRERLNERFC DLSAILEPGR PVRTDKPAIL DDAIRVLSQL KTESEELKKS  120
NEKLLEEIKC LKAEKNELRE EKLVLKADKE RIEKQLKGMA VAPAGFMAPP VAAAAAAYQA  180
GMNKMAVYPN YGYIPMWQYL PPSSRDTSHD HELRPPAA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0946680.0BT094668.1 Soybean clone JCVI-FLGm-5P4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003555760.11e-141PREDICTED: transcription factor bHLH104-like isoform X1
SwissprotQ8L4673e-73BH104_ARATH; Transcription factor bHLH104
TrEMBLA0A151T1V71e-161A0A151T1V7_CAJCA; Transcription factor bHLH104 family
STRINGGLYMA20G22010.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81792537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.21e-45bHLH family protein