PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_21224
Common NameKK1_021853
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 469aa    MW: 51695.2 Da    PI: 6.8554
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_21224genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-10346387655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR +i +++ +L++l+P+         +Ka +L +AveYIk+Lq
  C.cajan_21224 346 SIAERVRRTKISERMRKLQDLVPNM--------DKANMLDLAVEYIKDLQ 387
                    689*********************7........6***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.998340386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-13343394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.11E-12344391No hitNo description
Gene3DG3DSA:4.10.280.101.7E-12345394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-12346392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7346387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MESDLQQHPP MFLDHHQQQM NSGLTRYRSA PSSYFSSIID REFYEHVFNR PSSPETERML  60
TRFVNSLGGG DADADAEDSL ATQNPPTVVA VKEEVNVNPQ PQDVPSMSNE PRVLQQQQQS  120
NINSYGSSAP HSFYQNTGRP PLPNQMKTGR GSSSSLIRHG SSPAGLFSNI NIETGYAAVR  180
GMGTMGAVSN TSEEANFSPA TGMKNAPNYA SGLMSSRAEI GNTSNAQNNA ENEGFAESQG  240
NEFIPGFPVG AWDDSTIMSD NMTGLKRFRE EDVKPFSGLN AAENQVECTV GSRNETGGQP  300
SSALAHQLSL PNTSAEMAAI EKFLQLSDSV PCKIRAKRGC ATHPRSIAER VRRTKISERM  360
RKLQDLVPNM DKANMLDLAV EYIKDLQKQV QIAKINTIQV LLSLVVKLDW PHVKNVFLHG  420
EFFLSQRKYA LDLLKETSLV ARSTTKPKLK GMVLGLCECL WLRLLLQDL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311181e-119KT031118.1 Glycine max clone HN_CCL_179 bHLH transcription factor (Glyma11g13960.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007131988.10.0hypothetical protein PHAVU_011G057400g
TrEMBLA0A151TMG00.0A0A151TMG0_CAJCA; Transcription factor bHLH122 family
STRINGGLYMA11G13960.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.11e-60bHLH family protein