PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18697
Common NameKK1_019242
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 185aa    MW: 20700.4 Da    PI: 9.7656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18697genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.2e-183887255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ykGVr++  +g+Wv+eIr+p   + r +r++lg+f t  +Aa a++aa+++l+g
  C.cajan_18697 38 TYKGVRQRT-WGKWVVEIREP---N-RgARIWLGTFETSHQAALAYDAAARRLYG 87
                   69****999.**********8...3.35************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.19E-193797No hitNo description
PROSITE profilePS5103221.7733895IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-203896IPR016177DNA-binding domain
PfamPF008473.4E-133887IPR001471AP2/ERF domain
SMARTSM003801.0E-3138101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-293896IPR001471AP2/ERF domain
PRINTSPR003677.7E-103950IPR001471AP2/ERF domain
PRINTSPR003677.7E-106177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MKSGVGIEER KQVKKRAPSR SRKGCMRGKG GPENASCTYK GVRQRTWGKW VVEIREPNRG  60
ARIWLGTFET SHQAALAYDA AARRLYGSDA KLNLPHLSIK PQSHSHSSQN NININMAACS  120
NFNTNTNTMV PLPLDTNPKP LENEAEFRLW TPPVFDDSIW TEAAMSLDFP LLAPDTSENN  180
SYIIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-193995663ATERF1
3gcc_A9e-193995663ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity-inducible transcription. {ECO:0000269|PubMed:11798174}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18697
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By high-salt stress. {ECO:0000269|PubMed:11798174}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219832.11e-138dehydration-responsive element-binding protein 2D
SwissprotQ9LQZ28e-46DRE2D_ARATH; Dehydration-responsive element-binding protein 2D
TrEMBLA0A151TC641e-137A0A151TC64_CAJCA; Dehydration-responsive element-binding protein 2D
STRINGGLYMA04G03070.22e-75(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-35ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]