PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16935
Common NameKK1_017438
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 298aa    MW: 32770.9 Da    PI: 5.6308
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16935genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.71.1e-164896355
            AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   + GVr+++ +gr++AeIr p     +  r++lg+f+ta+eAa a+++a+++++g
  C.cajan_16935 48 FLGVRRRP-WGRYAAEIRNPI----TkERHWLGTFDTAQEAALAYDRAALSMKG 96
                   56******.**********72....36************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.25747104IPR001471AP2/ERF domain
CDDcd000182.23E-2747103No hitNo description
SMARTSM003801.9E-3047110IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-1948105IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.5E-2748104IPR001471AP2/ERF domain
PRINTSPR003671.0E-74859IPR001471AP2/ERF domain
PfamPF008473.2E-115096IPR001471AP2/ERF domain
PRINTSPR003671.0E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010102Biological Processlateral root morphogenesis
GO:0010432Biological Processbract development
GO:0010451Biological Processfloral meristem growth
GO:0010582Biological Processfloral meristem determinacy
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MSTSKTSNTS LKGYESNQSQ MSLSPLKLNT SPCGERRGRG KQAEPGRFLG VRRRPWGRYA  60
AEIRNPITKE RHWLGTFDTA QEAALAYDRA ALSMKGCQAR TNFIYSKDSN TFHNVGDSQP  120
LLPPSQFLTS THNTQNPTIQ SGLSQLGTIA SHIENPSDMS AYGSPPQDEN FFFSSDSNSG  180
YLECIVPDNC FRKSNASASS HVNSNSMQVK SHFDTTQEAL NMQTTVESNF ADFSYPSEGL  240
SWDNQRPWGC STSNELAAMF SNPSRVEEPF SVMTQAEADA SSSSLPPFGD VDLGYSLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-2038103571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00520DAPTransfer from AT5G18560Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16935
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-107AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221117.10.0ethylene-responsive transcription factor ERF086
TrEMBLA0A151T7460.0A0A151T746_CAJCA; Ethylene-responsive transcription factor ERF086 family
STRINGGLYMA13G28810.21e-158(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57843351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-49ERF family protein