PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16403
Common NameKK1_016885
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 132aa    MW: 15137 Da    PI: 4.929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16403genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.2e-181969255
            AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr ++ +g++ AeIrdp++      r +lg+f+taeeAa+a+++a+  l+g
  C.cajan_16403 19 RYRGVRKRP-WGKYGAEIRDPTKpT---GRQWLGTFDTAEEAARAYDRAAIGLRG 69
                   6********.**********97744...688*******************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.3011977IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-221979IPR016177DNA-binding domain
PfamPF008471.5E-101969IPR001471AP2/ERF domain
CDDcd000182.10E-281978No hitNo description
Gene3DG3DSA:3.30.730.108.8E-301979IPR001471AP2/ERF domain
SMARTSM003802.1E-301983IPR001471AP2/ERF domain
PRINTSPR003676.4E-112031IPR001471AP2/ERF domain
PRINTSPR003676.4E-114359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MEEAHMGEQE KERGGEEVRY RGVRKRPWGK YGAEIRDPTK PTGRQWLGTF DTAEEAARAY  60
DRAAIGLRGA LAILNFPDEY FSHLPFVLSN PSTKGNGSSF VAPRKEVIEF EYLDDKVLDD  120
LLELEEMRRK ET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-30141179114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16403
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150352e-60AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020221043.15e-93ethylene-responsive transcription factor ERF098
SwissprotQ9LTC52e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A151T5N41e-91A0A151T5N4_CAJCA; Ethylene-responsive transcription factor ERF098 family
STRINGGLYMA15G17090.14e-73(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-10ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]