PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_16397
Common NameKK1_016879
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 110aa    MW: 13211.1 Da    PI: 9.0598
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_16397genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-181666255
            AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr ++ +g++ AeIrdp++      r +lg+f+taeeAa+a+++a+  l+g
  C.cajan_16397 16 RYRGVRKRP-WGKYGAEIRDPTKpT---GRQWLGTFDTAEEAARAYDRAAIGLRG 66
                   6********.**********97744...688*******************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.19E-221675IPR016177DNA-binding domain
CDDcd000182.33E-271675No hitNo description
SMARTSM003803.2E-331680IPR001471AP2/ERF domain
PROSITE profilePS5103223.3011674IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.4E-301676IPR001471AP2/ERF domain
PfamPF008479.6E-111666IPR001471AP2/ERF domain
PRINTSPR003675.1E-111728IPR001471AP2/ERF domain
PRINTSPR003675.1E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    Send to blast
MEEAHKDKER EGEEVRYRGV RKRPWGKYGA EIRDPTKPTG RQWLGTFDTA EEAARAYDRA  60
AIGLRGALAI LNFPNEYYPH LTIYIYIYIY IYILLSYIYV RFSNFYFYLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-2613771175Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_16397
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0914589e-72BT091458.1 Soybean clone JCVI-FLGm-8C21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220196.13e-54ethylene-responsive transcription factor ERF098
SwissprotQ9LTC51e-32ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A151T5N08e-74A0A151T5N0_CAJCA; Ethylene-responsive transcription factor ERF098 family
STRINGGLYMA15G17090.16e-45(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-12ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]