PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_14476
Common NameKK1_014906
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family LBD
Protein Properties Length: 304aa    MW: 33010 Da    PI: 8.0137
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_14476genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601002.3e-314107199
         DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91 
                    +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q++
  C.cajan_14476   4 SCNGCRVLRKGCSDNCSIRPCLqwiknPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAA 99 
                    6*********************************************************************************************** PP

         DUF260  92 aelallke 99 
                    +e +l ++
  C.cajan_14476 100 VENVLKGA 107
                    99988765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381552.3E-991303IPR017414LOB domain-containing protein 10/36/41
PROSITE profilePS5089116.7193109IPR004883Lateral organ boundaries, LOB
PfamPF031958.0E-254102IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MRMSCNGCRV LRKGCSDNCS IRPCLQWIKN PESQANATVF LAKFYGRAGL MNLVNAGPEH  60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV ENVLKGAPIT PITSEAAASG  120
RGPPLKAYDI RHVSKDENSA ASNETQQQQQ RVKTRSRVKR PAAAATAKPK STHENNKESG  180
SGEPGFVVTS EWTEEALNRS GSHDSSLSHQ SEAANAVESE SMVSVETAET SNLFRDEPES  240
HPKRVDRSEE GGEHVGLELT LGFEPASRAV HVVPVKKRRI ELKEFSGSAQ SGSCKMELGL  300
EYSA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_14476
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020223716.10.0LOB domain-containing protein 41
SwissprotQ9M8861e-106LBD41_ARATH; LOB domain-containing protein 41
TrEMBLA0A151SXE60.0A0A151SXE6_CAJCA; LOB domain-containing protein 41
STRINGXP_007139150.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15463499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-100LOB domain-containing protein 41