PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13469
Common NameKK1_013881
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 397aa    MW: 43945.3 Da    PI: 5.7615
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13469genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12331376655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +++Er RR +i +++ +L++l+P+     +k  + a++L +Av+YIk+Lq
  C.cajan_13469 331 SIAERVRRTKISERMRKLQDLVPNM----DKQTNTADMLDLAVDYIKDLQ 376
                    689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.288325375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.42E-17328388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.64E-13329380No hitNo description
Gene3DG3DSA:4.10.280.107.0E-16330385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-9331376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-14331381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0042335Biological Processcuticle development
GO:0048573Biological Processphotoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MESDLEQQAP VNSSGLTRYR SAPSSYFSNI IDREFYEHIF NRPSSPETER VFSGFINSLS  60
ADAAPEEQEE EKEKEEEDSL HRKLSTDSAI KEEEVSNPQE HVALHGTNSN MSAYNSASHH  120
FFQTSSKPPL PNHNNFPSAM EGTYSMGLRN NSNLIRHSSS PAGLFSQINI ENVYAGVRGV  180
GTLGAVNNSV EEAKFSASRR LKNQQNFGSG RMSSIAEIGD RNREGSPDNE GFVDGGNDFM  240
AGFQGGGHWD DSAMMSDNVG GVKRFRENDG KPFSGAETQN ETGQNPGPLA HQMSLPNTSA  300
EMAAIEKFLH FSDSVPCKIR AKRGCATHPR SIAERVRRTK ISERMRKLQD LVPNMDKQTN  360
TADMLDLAVD YIKDLQKQVQ TLSDVQAKCT CSHEKQQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00646PBMTransfer from LOC_Os08g39630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0954350.0BT095435.1 Soybean clone JCVI-FLGm-25M5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003547061.10.0PREDICTED: transcription factor bHLH122-like isoform X3
TrEMBLA0A151SUI90.0A0A151SUI9_CAJCA; Transcription factor bHLH122 family
STRINGGLYMA15G03740.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41853455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.16e-73bHLH family protein