PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_13082
Common NameKK1_013486
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 272aa    MW: 30323.9 Da    PI: 7.5236
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_13082genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.0003426123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   +kC+ C+++Fs+   L  H+++H
  C.cajan_13082  4 HKCKLCSRTFSNGRALGGHMKSH 26
                   79*******************99 PP

2zf-C2H213.20.00026182204123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C+ C+k+F+++  L +H +++
  C.cajan_13082 182 HRCHGCHKTFRSSRALDSHTSVC 204
                    79*****************9876 PP

3zf-C2H213.20.00026215237123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y+Cp C+k+F +   L  H r+H
  C.cajan_13082 215 YQCPFCSKVFGSGQALGGHKRSH 237
                    9***************9999999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.4E-8327IPR007087Zinc finger, C2H2
SuperFamilySSF576674.92E-5329No hitNo description
PROSITE profilePS5015710.928431IPR007087Zinc finger, C2H2
SMARTSM003550.011426IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SMARTSM0035572182202IPR015880Zinc finger, C2H2-like
SuperFamilySSF576676.27E-6211238No hitNo description
Gene3DG3DSA:3.30.160.606.9E-4213237IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139124.5E-11215237IPR007087Zinc finger, C2H2
SMARTSM003550.0076215237IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.221215237IPR007087Zinc finger, C2H2
PROSITE patternPS000280217237IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MERHKCKLCS RTFSNGRALG GHMKSHLATL PLPPKPQPCN SSSWEDEDED EDEEKALIYY  60
GLRENPKKCF RLADPEFDTG SVVQDRESET ESKNPTGRRS KRTRRPANLD QPKRPKLSFM  120
ESPEPPALSS VSDTSPEEDV AMCLMMLSRD RWINNTTHVN VNAVAAQGSD EIKLTRVRGN  180
HHRCHGCHKT FRSSRALDSH TSVCQGLGNH NNKIYQCPFC SKVFGSGQAL GGHKRSHLVP  240
SSSSNLQLKE SFIDLNLPAP ADEDDLSVLS DA
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_13082
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020217928.10.0zinc finger protein ZAT9
TrEMBLA0A151TJF30.0A0A151TJF3_CAJCA; Uncharacterized protein
STRINGXP_007157307.11e-117(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76734122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.11e-41C2H2-like zinc finger protein