PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12756
Common NameKK1_013148
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 245aa    MW: 27424.7 Da    PI: 9.7799
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12756genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08148188954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  C.cajan_12756 148 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 188
                    699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434139188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-14140198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-14143198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14145194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-6149188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.03E-6162193No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010500Biological Processtransmitting tissue development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048462Biological Processcarpel formation
GO:2000012Biological Processregulation of auxin polar transport
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDVDILKTST SDTSMDMMMI MQMDQKFPEL CEPFYNHNTT STTLLHPETD FLTSTTTLPV  60
FSNPNVITPS PTFINTPPSS SNFLLQQPMT PPLQPNPSFS EKKNSVAAMR EMIFRVAVMQ  120
PIHIDPESIK PPKRRNVKIS KDPQSVAARH RRERISERIR ILQRLVPGGT KMDTASMLDE  180
AIHYVKFLKK QVQTLEQAGA SRPLNIVGFP ATTVSNANNV NYSAFVKSCQ PCQITPSAAS  240
KQMLT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007156796.11e-121hypothetical protein PHAVU_002G018300g
SwissprotQ9FHA78e-52HEC1_ARATH; Transcription factor HEC1
TrEMBLA0A151TIF40.0A0A151TIF4_CAJCA; Transcription factor HEC1
STRINGGLYMA01G39360.21e-109(Glycine max)
STRINGGLYMA11G05920.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-44bHLH family protein