PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12303
Common NameKK1_012677
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 292aa    MW: 33002.3 Da    PI: 4.4921
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12303genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.15.9e-12125168654
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  C.cajan_12303 125 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 168
                    589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491119168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-15122179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9125168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.70E-4126172No hitNo description
Gene3DG3DSA:4.10.280.108.9E-15126181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.32E-4218259No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MELSQLGFLD ELLAPRKDTW SALSSGLNEL LPSGWSFDSF DDNQELDSSY TRNDESVPLL  60
PQEDNPSLED EEFGFLGSDN QSLEQATNGC KIEEQVTEIP VFNMGMCGEK KPKSKKLEGQ  120
PSKNLMAERR RRKRLNDRLS MLRSIVPKIS KMDRTSILGD TIDYMKELLE RIGKLQEEEM  180
EEGTNQINLL GISKELKPNE VMVRNSPKFD VERRDQDTRI SICCATKPGL LLSTVNTLEA  240
LGLEIHQCVI SSFNDFSMQA SCSEVSEQRN CMSPEEIKQA LFRNAGYGGR CL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127134ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310970.0KT031097.1 Glycine max clone HN_CCL_167 bHLH transcription factor (Glyma01g02390.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003517154.10.0PREDICTED: transcription factor bHLH93-like isoform X1
SwissprotQ9LSL14e-90BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A151THB90.0A0A151THB9_CAJCA; Transcription factor bHLH93
STRINGGLYMA01G02390.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.14e-91beta HLH protein 93