PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09967
Common NameKK1_010251
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 271aa    MW: 29694.2 Da    PI: 8.6586
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09967genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.001493115123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y+C+ C+++F++   L  H  +H
  C.cajan_09967  93 YECKTCNRCFPSFQALGGHRASH 115
                    99**********99999998887 PP

2zf-C2H213.50.00021179201123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    ++C++Cg  F++   L  H+r+H
  C.cajan_09967 179 HECSICGAEFTSGQALGGHMRRH 201
                    78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.23E-692115No hitNo description
PROSITE profilePS5015710.47193120IPR007087Zinc finger, C2H2
SMARTSM003550.1493115IPR015880Zinc finger, C2H2-like
PfamPF139121.6E-1093117IPR007087Zinc finger, C2H2
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
SuperFamilySSF576672.23E-6174201No hitNo description
Gene3DG3DSA:3.30.160.609.6E-4177201IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.4E-12178202IPR007087Zinc finger, C2H2
PROSITE profilePS501579.723179201IPR007087Zinc finger, C2H2
SMARTSM003550.01179201IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280181201IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MQIMKGKRTK RQRLPSPLRL TMSTTCSSAG RSSTDNSIGF DHLPTTSRNE EEDMANCLIL  60
LAQGHNAPKP SRKSPPHVAA PGDHNNNEGL YLYECKTCNR CFPSFQALGG HRASHKKSKT  120
STEEKQGVIT TFGNEVDHHK HHGDCDHPTS TNLTLQLSTA LYNNNSSTRT IVNAKSKVHE  180
CSICGAEFTS GQALGGHMRR HRNLLSTPTT VSTIRANGGD GSPEVKHKDV LDLDLNLPAP  240
EDDHRESKPF PFQSKGKVIA FSATSLVDCH Y
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09967
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC9671271e-54KC967127.1 Glycine max C2H2-type zinc finger protein 6 (ZFP6) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213961.10.0zinc finger protein ZAT5
TrEMBLA0A151TVH30.0A0A151TVH3_CAJCA; Zinc finger protein 1
STRINGGLYMA19G37010.21e-133(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-53C2H2 family protein