PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09681
Common NameKK1_009955
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 124aa    MW: 14362.2 Da    PI: 6.1159
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09681genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-201767255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr+++ +g+++AeIrd s    +  r++lg+f taeeAa+a+++a+ +++g
  C.cajan_09681 17 KYRGVRRRP-WGKFAAEIRDSSR---HgNRVWLGTFNTAEEAARAYDRAAFEMRG 67
                   8********.**********433...259************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.9861775IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-321776IPR001471AP2/ERF domain
CDDcd000181.38E-311776No hitNo description
PfamPF008471.0E-151767IPR001471AP2/ERF domain
SMARTSM003803.9E-381781IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-241776IPR016177DNA-binding domain
PRINTSPR003671.2E-111829IPR001471AP2/ERF domain
PRINTSPR003671.2E-114157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MEDLKEMVKE EEPKQIKYRG VRRRPWGKFA AEIRDSSRHG NRVWLGTFNT AEEAARAYDR  60
AAFEMRGTLA ILNFPNEHPP CNVPSLGKSS SSRTQHQVVV FECLDDKLLE ELLDCDDKII  120
HENF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-321710814114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09681
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150379e-69AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020210920.18e-90ethylene-responsive transcription factor ERF098
SwissprotQ9LTC54e-40ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A151TUM52e-88A0A151TUM5_CAJCA; Ethylene-responsive transcription factor ERF098 family
STRINGXP_007162535.12e-54(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-26ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]