PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_08718
Common NameKK1_008973
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 338aa    MW: 36957.8 Da    PI: 6.8914
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_08718genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.15.1e-164796255
                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  C.cajan_08718 47 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 96
                   899*************************9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-1843117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-2344117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.0444595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.67E-1547100No hitNo description
PfamPF000102.3E-134796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-1251101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MRTGKGNQEE DEYEEEDFGS SKKQGTSSAS NTNKADGKAI DKASAIRSKH SVTEQRRRSK  60
INERFQILRD LIPHSDQKRD TASFLLEVIE YVQYLQEKVQ KYEGSYQGWG QEPSKLMPWR  120
NSHWRVQSFA GQPTGIKNGL GPVSPFPGKF DESSVNLSPT MLSGTQTTID ADQSRDIVSK  180
TAERQPDLAS KGIPLPVAMP MHANMSVPVR SDGVLAHPLQ GTVSDAQSTE CPTTSEPQNQ  240
QDELTVEGGT ISISSAYSQG LLNNLTQALQ SAGLDLSQAS ISVQINLGKR ANKGLNCGTS  300
SPKNHDNPSS NNQTLAHFRD TGSGEDSDQA QKRMKTYK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0935380.0BT093538.1 Soybean clone JCVI-FLGm-24O13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001241235.10.0uncharacterized protein LOC100816055
SwissprotQ9CAA41e-121BIM2_ARATH; Transcription factor BIM2
TrEMBLA0A151TRW50.0A0A151TRW5_CAJCA; Transcription factor BIM2
STRINGGLYMA02G13670.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-116BES1-interacting Myc-like protein 2