PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_07783
Common NameKK1_008008
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 296aa    MW: 32757.4 Da    PI: 5.4509
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_07783genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-102202601055
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  C.cajan_07783 220 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 260
                    9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.25210259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-14212276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-12214269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11216265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.08E-11219264No hitNo description
PfamPF000107.2E-8220260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MEPVQLISEE WGSLCGLHTT EEADFMAQLF GGNYSVTEKH CGNTSFGFWP SHESTTVTMA  60
DTNSNSNFVS NVTDTNFLCF SQGSSSSTDS GELSLDPVAL ADNNLQAKRE YEIMVSEPVQ  120
EDGSRNLETL TKRLRSSIEV SKTVRNAKSR KNPKSASMSN DEDDRSLSLP RHSCFSQGDS  180
NASLEPNGGV SSKDLASPNS YRKSRATTRP ATDSQSLYAR KRRERINERL RILQNLVPNG  240
TKVDISTMLE EAVQYVKFLQ LQIKLLSSDD LWMYAPIAFN GINMGLDLSI SPTKGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351772e-78AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003555292.11e-160PREDICTED: transcription factor bHLH84-like
TrEMBLA0A151U7P80.0A0A151U7P8_CAJCA; Transcription factor bHLH84
STRINGGLYMA10G40360.21e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-37bHLH family protein