PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05569
Common NameKK1_005709
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 345aa    MW: 38012.7 Da    PI: 4.8574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05569genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.1e-1778128155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    + y+GVr++  +g+Wv eIr+p   + r  r +lg+f ta+eAa a+++a+++++g
  C.cajan_05569  78 CNYRGVRQRT-WGKWVGEIREP---N-RgNRLWLGTFSTAQEAALAYDEAARAMYG 128
                    56*****999.**********8...2.359***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.0E-1278128IPR001471AP2/ERF domain
CDDcd000181.32E-3178137No hitNo description
SMARTSM003802.2E-3479142IPR001471AP2/ERF domain
PROSITE profilePS5103221.58879136IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-2179137IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.1E-3179137IPR001471AP2/ERF domain
PRINTSPR003673.6E-108091IPR001471AP2/ERF domain
PRINTSPR003673.6E-10102118IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MGAYDQVSLK PLDSSRKRKS RSRGDGSRSV AETIAKWKEY NEHLYSGKDD GRPTRKAPAK  60
GSKKGCMKGK GGPQNSQCNY RGVRQRTWGK WVGEIREPNR GNRLWLGTFS TAQEAALAYD  120
EAARAMYGPC ARLNFPHISD YASVKESLKE SSLAASSSCS SAATAVSETT TTTSNQSEVC  180
AAEDVKEKSR EATHDAGQVA EDVNRDQMDF SWIDNFDFND DYLKSFSTDE LFQVDELLGH  240
LDNNPIDDTG LMQGLDFGQM GFPGNGNNPQ VDTPSSFFYQ LQNPDAKLLG SLPHMDHTSS  300
GVDYGLDFLK IVEPGDYNAG EPPQFLNLDD DLNNDSKGIQ AMKHD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-1779136260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11419SRKRKS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_05569
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4403860.0JX440386.1 Glycine max DRE-binding protein 2A;1 (DREB2A;1) mRNA, complete cds.
GenBankKT0312680.0KT031268.1 Glycine max clone HN_CCL_68 AP2-EREBP transcription factor (Glyma14g06080.1_like2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237044.10.0dehydration-responsive element-binding protein 2C
TrEMBLA0A151U1A10.0A0A151U1A1_CAJCA; Dehydration-responsive element-binding protein 2C
STRINGGLYMA02G42960.11e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117534106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.14e-38ERF family protein