PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05545
Common NameKK1_005683
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 258aa    MW: 28496.7 Da    PI: 8.8469
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05545genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46.1e-1470116354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  +v+++k+L
  C.cajan_05545  70 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSVVDHVKDL 116
                    79*************************8.....7****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.41567116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-1368119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-1170116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.68E-1170119No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1570119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1173122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.00E-4163228No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MLCIVLMESY YYTGWPLATN VAQCNSAPNS DQLSPFSVPT QIASDPATLQ FGEFPSWPTP  60
IEDRAASASK SHSQAEKRRR DRINAQLATL RKLIPKSDKM DKAALLGSVV DHVKDLKRKA  120
MDVSKAITVP TETDEVTIDY HQAQDESYNK VNILKENIII KASVCCDDRP ELFPEIIQVL  180
KGLRLTAVKA DIASVGGRIK SILVICSKDS EEGNSVCLST LKQSLKSAVN KIASLSVATN  240
CPTRSKRQRF FLPSHYVQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0900460.0BT090046.1 Soybean clone JCVI-FLGm-3B13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007141752.11e-164hypothetical protein PHAVU_008G222700g
TrEMBLA0A151U1690.0A0A151U169_CAJCA; Transcription factor bHLH51
STRINGGLYMA14G06330.11e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57963351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.18e-52bHLH family protein