PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_05317
Common NameKK1_005449
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NF-YC
Protein Properties Length: 176aa    MW: 20146.8 Da    PI: 4.4713
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_05317genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC129.11.5e-4041142199
          NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 
                    ql++ w++    ie++tdf+ h+lPl +i ki+k d dv+m+saeaPvl++kacel+i elt+++w++a+++kr  ++k+di+aa+t+td fdfl 
  C.cajan_05317  41 QLNNCWARLcqeIEETTDFNTHSLPLDKIEKIMKDDGDVHMVSAEAPVLFAKACELLIHELTMKAWVNADKSKRDLIQKCDIEAAITNTDEFDFLA 136
                    577778653334************************************************************************************ PP

          NF-YC  94 divprd 99 
                    d+vp +
  C.cajan_05317 137 DVVPIE 142
                    ***987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF471133.42E-2653143IPR009072Histone-fold
PfamPF008089.1E-1663126IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene3DG3DSA:1.10.20.102.4E-2964140IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MEATNPPPQA TNTCIPPPYP IQQQYAPHYM YDPQEDHLQH QLNNCWARLC QEIEETTDFN  60
THSLPLDKIE KIMKDDGDVH MVSAEAPVLF AKACELLIHE LTMKAWVNAD KSKRDLIQKC  120
DIEAAITNTD EFDFLADVVP IEHVGISRRD IDPTQIVPYY YMPPHQHVIG PPFDAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4g91_C6e-294214019118HapE
4g92_C6e-294214019118HapE
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014634043.17e-54PREDICTED: nuclear transcription factor Y subunit C-2-like
SwissprotQ8LCG76e-40NFYC2_ARATH; Nuclear transcription factor Y subunit C-2
TrEMBLA0A151U0K81e-129A0A151U0K8_CAJCA; Nuclear transcription factor Y subunit C-2
STRINGGLYMA08G15700.11e-53(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125734108
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.24e-41nuclear factor Y, subunit C2