PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_04176
Common NameKK1_004277
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family C2H2
Protein Properties Length: 374aa    MW: 40522.4 Da    PI: 7.6737
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_04176genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.0012222323
                   ETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                   C++C+k Fs+   L  H+r H
  C.cajan_04176  2 CQICNKGFSSGKALGGHLRIH 22
                   *******************99 PP

2zf-C2H216.72.1e-055475223
                   EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                   +C  CgksF +  +L  H+r+H
  C.cajan_04176 54 TCALCGKSFCSMKSLFGHMRSH 75
                   6********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576679.49E-8175No hitNo description
SMARTSM0035515122IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.637127IPR007087Zinc finger, C2H2
PfamPF139123.7E-7222IPR007087Zinc finger, C2H2
PROSITE patternPS000280222IPR007087Zinc finger, C2H2
PROSITE profilePS501579.8895375IPR007087Zinc finger, C2H2
SMARTSM003550.0385375IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.600.0015475IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS0002805575IPR007087Zinc finger, C2H2
PfamPF139122.2E-55577IPR007087Zinc finger, C2H2
SMARTSM00355250226244IPR015880Zinc finger, C2H2-like
PfamPF139120.02227245IPR007087Zinc finger, C2H2
SMARTSM00355180288310IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MCQICNKGFS SGKALGGHLR IHNVSRKQLS RANQGVTKPK TKNKWVLVSG NNPTCALCGK  60
SFCSMKSLFG HMRSHPEKLR RGIQSIIHNN GASSNSTCSS TLSDDSAVDL SQTLSGWSKT  120
AKRGRKSPSS SNANSGLEDD GIEERMQEAV YELMLLASGD PKREEELHGD QIQEKPLNCE  180
KGLLLLKPDF GNSGVKKIYR KKGAKKMKSI ELEAAEEENK LVRSGLCNTT FSSHQALEGH  240
LCSHENSKNI EVMEESESVS ATGDRTTMQG NETGTVLGGC AVEAMRGYQC KIFNKTFSIG  300
PAFGDHKGSH WTGMAEAQSA QETSSLVENG QNCSKVLAFD LNQPPAILDE EDGVQSDLFV  360
SVNIMASSSY NSSF
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_04176
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020228069.10.0zinc finger protein ZAT1
TrEMBLA0A151STA40.0A0A151STA4_CAJCA; Uncharacterized protein
STRINGGLYMA16G18060.11e-145(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97372437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26940.17e-14C2H2 family protein