PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03188
Common NameKK1_003260
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 443aa    MW: 49847.8 Da    PI: 4.8229
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03188genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1093.6e-34171072101
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Fl k+ye+++d+++ e++sws+ +nsf+v+++ +f++ +Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+         weF+++ F +++k+ll++i
  C.cajan_03188  17 FLLKTYEMVDDSSTAEIVSWSSANNSFIVWNPADFSRLLLPTFFKHNNFTSFIRQLNTYGFRKVHPER---------WEFANEDFVRDQKHLLKNI 103
                    9****************************************************************999.........******************* PP

                    XXXX CS
   HSF_DNA-bind  98 krkk 101
                    +r+k
  C.cajan_03188 104 HRRK 107
                    **98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467857.89E-3413106IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004152.5E-5813106IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.107.7E-3713106IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.4E-2917106IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.4E-171740IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.4E-175567IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405680IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.4E-176880IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MEGSGSGSGS GVGPAPFLLK TYEMVDDSST AEIVSWSSAN NSFIVWNPAD FSRLLLPTFF  60
KHNNFTSFIR QLNTYGFRKV HPERWEFANE DFVRDQKHLL KNIHRRKPIH SHTHPVADPE  120
RLAFEEEIEK LSHDKTTIQS SIFRFEQHHS AAKTHLEDLQ HRLDGMEERQ TTLLNYFEKA  180
LRNPTIVQQI SRRIESLDLL AYNKKRRLPQ VDDHDHPLHH PVPENSFVDN FGMEFGNISH  240
QDFSNKLTLE LSPAVSDMNL VVSCSTQSSN EDGESPHEIL PAQTGASFTF QMDSSESPKL  300
DSNGEDGDSY ISCLLNLTLA SSPLQVKRNS CTDRSPPQID CPEFGKLAES KSCADDNKEY  360
DVGESSSRNV NEVANLADAE APPDAPVRVN DVFWEQFLTE RPGCSDNDDS TSTHKANAYA  420
EQDEGRSVHE ISGNAINMDQ LTL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5v_D2e-20310617129Heat shock factor protein 1
5d5v_B2e-20310617129Heat shock factor protein 1
5d5u_B2e-20310617129Heat shock factor protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007163811.10.0hypothetical protein PHAVU_001G266300g
SwissprotQ94BZ51e-136HSFA5_ARATH; Heat stress transcription factor A-5
TrEMBLA0A151SQG80.0A0A151SQG8_CAJCA; Heat stress transcription factor A-5
STRINGGLYMA05G28460.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49613253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13980.11e-132HSF family protein