PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02933
Common NameKK1_003002
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 182aa    MW: 20431.5 Da    PI: 9.6559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02933genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.92.9e-142675255
            AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ GVr+++ +grW AeI+       ++ r +lg+f+ ae+Aa a++ a++ l+g
  C.cajan_02933 26 RFLGVRQRP-SGRWIAEIKG----SsQKLRLWLGTFDKAEDAAMAYDYAARLLRG 75
                   578******.7******766....2346***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.22E-192584No hitNo description
PROSITE profilePS5103219.3752683IPR001471AP2/ERF domain
SMARTSM003803.8E-302689IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-262684IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-192783IPR016177DNA-binding domain
PRINTSPR003677.0E-72738IPR001471AP2/ERF domain
PfamPF008471.1E-92975IPR001471AP2/ERF domain
PRINTSPR003677.0E-74965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MPIEIDKSYE KRVVKVPTVG NKREKRFLGV RQRPSGRWIA EIKGSSQKLR LWLGTFDKAE  60
DAAMAYDYAA RLLRGRNAKT NFPNPGTMNT HEEDCNILGK NPRAYQLLKH VVMKNHALST  120
VMPWKNQIMM RDKFDTLVEE TIVCSIPEQG SDGCCGISLG SSKVYSSVVV APSFSASHEE  180
TP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-132583160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-132583463ATERF1
3gcc_A3e-132583463ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02933
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0968630.0BT096863.1 Soybean clone JCVI-FLGm-15D24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225681.11e-136ethylene-responsive transcription factor ERF069
TrEMBLA0A151SPQ01e-135A0A151SPQ0_CAJCA; Ethylene-responsive transcription factor RAP2-11
STRINGXP_007155177.11e-103(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF123492734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-18related to AP2 11