PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_01740
Common NameKK1_001783
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 556aa    MW: 61559.9 Da    PI: 7.2719
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_01740genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.86.8e-073694021755
                    HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    N++f  Lr+l+P       +K++Ka+iL  ++eY+k+L+
  C.cajan_01740 369 NHRFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 402
                    8999*********8.....8*****************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.9E-599191IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088810.232352401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.7E-6362407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-11369422IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.51E-8369406No hitNo description
SuperFamilySSF474593.79E-11369422IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-4369401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010026Biological Processtrichome differentiation
GO:0010214Biological Processseed coat development
GO:2000029Biological Processregulation of proanthocyanidin biosynthetic process
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 556 aa     Download sequence    Send to blast
MAAPLGNRLQ SMLQAAVQSV HWTYSLFWQL CPQQVILVWG DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNPPTRR PCAALSPEDL TESEWFYLMC VSFTFPPGVG  120
LPGKAYARRQ HVWLTGANEA DSKTFSRAIL AKSARIQTVV CIPLLDGVVE LGTTDKVQED  180
LSFVQHVKSF FIDHNSPLPP KPALSEHSTS NPTSSSDHIP AVIELMQLEM PEDIRVGSPN  240
DGSNNLDSDF HLLAVTLVPL EELSQEDTHY SQTVSNILQS QSSRWPRSPP SVGYNTFSTH  300
SAFAKWTTRA THHFHPAVDG TNQWLLKYIL FTVPYLHAKS PADSSPQGAA AADPKLRGKG  360
TPQDELSANH RFIILRSLVP FVTKMDKASI LGDTIEYVKQ LRRKIQELEA RNRQTEAERS  420
KLPEVTVQRT SSSSSKEQQK SGVTVMDKRK VRIVEGAAAK AKAVDVAAAT TSVQVSIIES  480
DALLELECPH REGLLLDVMQ MLREVRIEVT GVQSSLNNGV FVAELRAKVK ENANGKKVSI  540
VEVKRALNQI IPHIVD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4yz6_A3e-2491919192Transcription factor MYC3
4rs9_A3e-2491919192Transcription factor MYC3
4rqw_B3e-2491919192Transcription factor MYC3
4rqw_A3e-2491919192Transcription factor MYC3
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006575074.10.0PREDICTED: basic helix-loop-helix protein A-like
SwissprotE3SXU40.0BHLHW_PEA; Basic helix-loop-helix protein A
TrEMBLA0A151SL540.0A0A151SL54_CAJCA; Transcription factor TT8
STRINGGLYMA02G16670.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36373249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.11e-164bHLH family protein