PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012570599.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 320aa    MW: 36526.7 Da    PI: 6.9235
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012570599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-08145189554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h ++Er+RR ++ ++f  L   +P +     kK +K +iL +A+ Y+k L
  XP_012570599.1 145 HIIAERKRRLELTQKFIALSATIPGL-----KKTDKTTILGEAISYVKVL 189
                     899***********************.....9***************977 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.205140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-14143205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-6145189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.43E-6145194No hitNo description
Gene3DG3DSA:4.10.280.105.8E-14145202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-9146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MPKFPSSFVC DLENMAEQCQ NSIDDDDEFL RNIFLQQPEE AKSSSESENQ LQYLQLQNNN  60
NRSEKRVHNS KMTTPRTFII SFDKSTIIPA ATVEVEEEPN KRMERRSGSK LPNSPLSENK  120
KSMDSKSKAN QGGKKSRSDS QYLDHIIAER KRRLELTQKF IALSATIPGL KKTDKTTILG  180
EAISYVKVLK ERVRELEERN KMKTESTIIL NKNDFCSNDT NLEDWCELLP DVKVRVLENE  240
VLIEIHCEKQ NGIEIKILDL LENNLHLLVT ASSVLPFGNS TLGITIIAQM GVAYKVTVND  300
LVKPLRQLLL NIRTNKTDPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148153ERKRRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012570599.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012570599.10.0transcription factor bHLH18-like isoform X2
SwissprotQ9T0728e-41BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1S3E5E70.0A0A1S3E5E7_CICAR; transcription factor bHLH18-like isoform X2
STRINGXP_004486628.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-30bHLH family protein