PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012569551.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 147aa    MW: 17061.7 Da    PI: 8.446
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012569551.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.56.9e-1391140255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +ykGVr +  +g++v+eIr p     + kr +lg+f+ta+eA  a+ a ++++e+
  XP_012569551.1  91 KYKGVRMRA-SGKYVSEIRNPL----KaKREWLGTFDTAKEASDAYQAKKQEFEK 140
                     8*****999.7*********73....46********************9999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.2E-691140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-1891142IPR001471AP2/ERF domain
CDDcd000182.95E-1791131No hitNo description
SMARTSM003801.3E-791140IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-1391140IPR016177DNA-binding domain
PROSITE profilePS5103215.2991147IPR001471AP2/ERF domain
PRINTSPR003673.5E-692103IPR001471AP2/ERF domain
PRINTSPR003673.5E-6114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MKGLYEIIII IIIILNLSLI MVPQSHISKR TKTLRIIMDD SDATDSSSDE DGNFEKRMMR  60
KRFVYEFTVP NFPRDNGCVD EIMNVDNGME KYKGVRMRAS GKYVSEIRNP LKAKREWLGT  120
FDTAKEASDA YQAKKQEFEK AQQCYLC
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012569551.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027188914.14e-84ethylene-responsive transcription factor CRF1-like
TrEMBLA0A3Q7X5F49e-83A0A3Q7X5F4_CICAR; ethylene-responsive transcription factor CRF1-like
STRINGXP_004494947.12e-69(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-13ERF family protein