PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004514952.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 252aa    MW: 27736.7 Da    PI: 6.3553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004514952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-183686155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  XP_004514952.1 36 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 86
                    59*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.14E-173694No hitNo description
SuperFamilySSF541711.44E-193795IPR016177DNA-binding domain
PROSITE profilePS5103221.5623794IPR001471AP2/ERF domain
PfamPF008472.3E-113786IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-303795IPR001471AP2/ERF domain
SMARTSM003809.4E-3637100IPR001471AP2/ERF domain
PRINTSPR003676.2E-93849IPR001471AP2/ERF domain
PRINTSPR003676.2E-96076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MVKAEKKINK EKSKPMQNQP LSISSSEISA SNEKKKKYKG VRMRSWGSWV SEIRAPNQKT  60
RIWLGSYSTA EAAARAYDAA LLCLKGSSAN FNFPLNKNSS HNFIPQQNNN NNNVVMSPKS  120
IQRVAAAAAA ANNINDIAIN TPPSSNPVST TTTSSSLVSS PSMSTSSPNS DQIHDNDDVS  180
LFSSFGAYTS CDHQANESMA MMDSWYGFDG LQSPKHVNDH MLLSEALFDI DSTQVLLDDW  240
YEEGDISLWS FY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-163499268ATERF1
3gcc_A4e-163499268ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004514952.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1467575e-63BT146757.1 Medicago truncatula clone JCVI-FLMt-5M3 unknown mRNA.
GenBankCR5387235e-63CR538723.1 M.truncatula DNA sequence from clone MTH2-27D24 on chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027186508.10.0LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF014-like
TrEMBLA0A3Q7XJ960.0A0A3Q7XJ96_CICAR; LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF014-like
STRINGXP_004514952.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-29ERF family protein