PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004497526.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family TCP
Protein Properties Length: 198aa    MW: 21123.7 Da    PI: 8.3552
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004497526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP114.61.3e-3540138389
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 
                     ++ ++++++hTkv+gR+RRvR++ +caar+F+L++eLG+ +d++tieWLl+ a+p+i+++tgt++ +a  ++++s +ss+s +s +         
  XP_004497526.1  40 TASRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAAPVSTVSPVSSSSVPSVSchvqpvssv 134
                     56789**********************************************************88888666555555555544444444444444 PP

             TCP  89 ...k 89 
                         
  XP_004497526.1 135 gpgG 138
                     4441 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.5E-3044147IPR005333Transcription factor, TCP
PROSITE profilePS5136927.044599IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MTSELVIHTF SQPQTNKPST ATASDPNSQI STVKRTSTTT ASRSTKDRHT KVNGRGRRVR  60
MPPLCAARIF QLTRELGHRS DGETIEWLLR HAEPSIIAAT GTGTVPAAPV STVSPVSSSS  120
VPSVSCHVQP VSSVGPGGQG MFAAAMSQPQ PSCRLDLCQP PGMEYAAANG YRHMPFTALL  180
LQPTTAEENQ QEEALSEQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004497526.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004497526.11e-144transcription factor TCP11
SwissprotQ9SJK73e-43TCP11_ARATH; Transcription factor TCP11
TrEMBLA0A1S2Y0X31e-142A0A1S2Y0X3_CICAR; transcription factor TCP11
STRINGXP_004497526.11e-143(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37000.12e-35TCP family protein