PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493770.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 150aa    MW: 17113.3 Da    PI: 6.9468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-172777255
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+ +AeIrd      ++ +r++lg+f taeeAa+a+++a+  ++g
  XP_004493770.1 27 KYRGVRRRP-WGKCAAEIRD----SaRHgARVWLGTFNTAEEAARAYDRAAFDMRG 77
                    8********.**********....33236***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.2092785IPR001471AP2/ERF domain
PfamPF008473.8E-132777IPR001471AP2/ERF domain
SMARTSM003806.1E-352791IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-232787IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.7E-312786IPR001471AP2/ERF domain
CDDcd000184.47E-302786No hitNo description
PRINTSPR003675.0E-112839IPR001471AP2/ERF domain
PRINTSPR003675.0E-115167IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MLISNNILAH TMEEEKVKQG ELPKQIKYRG VRRRPWGKCA AEIRDSARHG ARVWLGTFNT  60
AEEAARAYDR AAFDMRGSSA ILNFPHEHFP CNMAYNPSKS SSSTSISSSS SIVNKSELGK  120
QQVLEFEYLD EKLLEELLDF ENTIDPNWFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-352713314114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004493770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493770.11e-110ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC56e-43ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A1S2XSA71e-109A0A1S2XSA7_CICAR; ethylene-responsive transcription factor ERF098-like
STRINGXP_004493770.11e-109(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.13e-27ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]