PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004491005.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 404aa    MW: 44606.3 Da    PI: 4.8325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004491005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-1884134155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv eIr+p   + r kr +lg+f ta+eAa a+++a+++++g
  XP_004491005.1  84 CNYRGVRQRT-WGKWVGEIREP---N-RgKRLWLGTFSTAQEAALAYDEAARAMYG 134
                     56*****999.**********8...3.35************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.23E-3384144No hitNo description
PfamPF008478.9E-1384134IPR001471AP2/ERF domain
SMARTSM003804.3E-3785148IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-3285143IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2185143IPR016177DNA-binding domain
PROSITE profilePS5103222.18185142IPR001471AP2/ERF domain
PRINTSPR003673.4E-108697IPR001471AP2/ERF domain
PRINTSPR003673.4E-10108124IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MGAAYEQSGN VFLAPIETSR KRKTRSRGKG TRSVAETIAK WKEYNEHIYA AAGKDDAKQK  60
RKAPAKGSKK GCMKGKGGPQ NSECNYRGVR QRTWGKWVGE IREPNRGKRL WLGTFSTAQE  120
AALAYDEAAR AMYGPSARLN FPHVSDYSSI KESLKESTAA SYSCSSVATT PATSEITTVS  180
SHSDVFAVED VKEIPKPVNM KNDNTVAVYR EVYEASSPIS RMKQEPKDEP ADIIDPGGGE  240
IQDGKSEGNQ TQTLTHDVQI GEGVCNGQMD LSWIDDFDFN GDYLKSFSMD ELFQVDELLG  300
HIDNNPIDES GLVRSLDFGQ MGFPEQSNPQ VGTSSSFFYE LENPDAKLLG SLPHMEHTTS  360
GVDYGLDFLK TEEPGNFNIG VEDTPFLNLD YDMNHDMSHD SRGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1885142260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11823SRKRKT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004491005.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004491005.10.0dehydration-responsive element-binding protein 2C
RefseqXP_012568534.10.0dehydration-responsive element-binding protein 2C
TrEMBLA0A1S3DZF50.0A0A1S3DZF5_CICAR; dehydration-responsive element-binding protein 2C
STRINGXP_004491005.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117534106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.19e-43ERF family protein