PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490032.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family TCP
Protein Properties Length: 385aa    MW: 40663.6 Da    PI: 7.0011
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP134.78.4e-42631932121
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     ++k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++       
  XP_004490032.1  63 PPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshyfrae 157
                     789******************************************************************99988888888888666666677777 PP

             TCP  89 ...kaaksaakskksqksaasalnlakesrakarar 121
                        + +++++ ++++++s ++ ln+++ ++a  +a+
  XP_004490032.1 158 dsrRTNSTNMLENHNPSSLSAILNFNNVQNAILQAK 193
                     764444444477777777777777777666544444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.6E-4168234IPR005333Transcription factor, TCP
PROSITE profilePS5136927.68369123IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MELEADHHQN NGIRSRPNFP LQLLEKKDII DDISEQPCST TANDGCSAIV TSNNTADQQK  60
KPPPKRASTK DRHTKVDGRG RRIRMPAACA ARVFQLTREL GHKSDGETIE WLLQQAEPAV  120
IAATGTGTIP ANFTSLNISL RSSGSTMSAP SHYFRAEDSR RTNSTNMLEN HNPSSLSAIL  180
NFNNVQNAIL QAKQELREEN AAAGGGGGFE SVASDSDGNI GRKRRSEQEF LSQNMGSYLL  240
QSNVGSLPSS HASNTAAFWM VTGHGNQGVN VGGGGNGNEP IWAIPSVGNS GNLYRGAMSS  300
PNGIHFMNFG SPMSLMPGSQ LGSGIVGVGG GNGGFLAESN LNMLSAMNAY RQINSTNCVS  360
DSSGQHHGGG GSGRDDGHDS TSQHS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490032.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490032.10.0transcription factor TCP15-like isoform X2
TrEMBLA0A1S2XIX90.0A0A1S2XIX9_CICAR; transcription factor TCP15-like isoform X2
STRINGXP_004490031.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.14e-60TCP family protein