PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004490031.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family TCP
Protein Properties Length: 425aa    MW: 45031.4 Da    PI: 7.1891
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004490031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.76.7e-41631902114
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     ++k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++       
  XP_004490031.1  63 PPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPshyfrgn 157
                     789******************************************************************99987777777777555555556666 PP

             TCP  89 .......kaaksaakskksqksaasalnlakes 114
                            ++a++aa + +s+++ + + n++++ 
  XP_004490031.1 158 yfnpssfSSAAAAAAQVRSRAEWERTININNNI 190
                     666655533333333333333333333333333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036344.7E-4068239IPR005333Transcription factor, TCP
PROSITE profilePS5136927.68369123IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MELEADHHQN NGIRSRPNFP LQLLEKKDII DDISEQPCST TANDGCSAIV TSNNTADQQK  60
KPPPKRASTK DRHTKVDGRG RRIRMPAACA ARVFQLTREL GHKSDGETIE WLLQQAEPAV  120
IAATGTGTIP ANFTSLNISL RSSGSTMSAP SHYFRGNYFN PSSFSSAAAA AAQVRSRAEW  180
ERTININNNI NMNVVAEDSR RTNSTNMLEN HNPSSLSAIL NFNNVQNAIL QAKQELREEN  240
AAAGGGGGFE SVASDSDGNI GRKRRSEQEF LSQNMGSYLL QSNVGSLPSS HASNTAAFWM  300
VTGHGNQGVN VGGGGNGNEP IWAIPSVGNS GNLYRGAMSS PNGIHFMNFG SPMSLMPGSQ  360
LGSGIVGVGG GNGGFLAESN LNMLSAMNAY RQINSTNCVS DSSGQHHGGG GSGRDDGHDS  420
TSQHS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004490031.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004490031.10.0transcription factor TCP14-like isoform X1
TrEMBLA0A1S2XLE20.0A0A1S2XLE2_CICAR; transcription factor TCP14-like isoform X1
STRINGXP_004490031.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.16e-53TCP family protein