PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487930.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 128aa    MW: 14660.2 Da    PI: 5.0517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.5e-171262255
             AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +g++ AeIrdp++      r +lg+f+taeeAa+a++  + +l+g
  XP_004487930.1 12 KYRGVRKRP-WGKYGAEIRDPTKpT---GRQWLGTFDTAEEAARAYDCEAIRLRG 62
                    8********.**********97744...688********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.60E-301271No hitNo description
PfamPF008478.8E-101262IPR001471AP2/ERF domain
PROSITE profilePS5103223.0641270IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.9E-291272IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-211271IPR016177DNA-binding domain
SMARTSM003803.1E-311276IPR001471AP2/ERF domain
PRINTSPR003676.1E-111324IPR001471AP2/ERF domain
PRINTSPR003676.1E-113652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MEEEHKGGEE VKYRGVRKRP WGKYGAEIRD PTKPTGRQWL GTFDTAEEAA RAYDCEAIRL  60
RGALAILNFP NEYNFHLSSL SPSTSTTTNI HTNSSTQHKE IIEFEYLDNK VLEDLLGLSE  120
KDNQNKEE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-3271289131Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004487930.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487930.14e-92ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC53e-36ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A1S2XE429e-91A0A1S2XE42_CICAR; ethylene-responsive transcription factor ERF096-like
STRINGXP_004487930.11e-91(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-34ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]