PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487634.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 468aa    MW: 52224.2 Da    PI: 6.3566
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487634.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.8e-063583961154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_004487634.1 358 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 396
                     5778999**********998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.582347396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-11357409IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.58E-7357400No hitNo description
SMARTSM003530.0049358402IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-9361404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MADDDQFHHS SGNSNWWDTS RNNMRFDQSG TSQTSSSNNI VDFAWQNSDM VDIKPRSSSM  60
DDNSSIVFHD DTQKLQQPQD SSTTSIDPNL HMMGLGLSSH AMDWNQPPLI RSEKGSSENN  120
LRSMLEENLS STRNNFEQEN MMGLCQGQIQ WRSSSDQKLF SAVESSSNEF KQVNNRSFSL  180
DQNQFSPSYS SGESNVTSQG LMDYGTPSIL QGLLGSDHSN NIQHQQQQGS FENRPMSFSY  240
TTNNYGLNSN NELNIPSNWS TKVPQFLRTN SPPKQQPPNN QLHFTNNTPF WNASEAANSI  300
KDVRSSFFPS LQPQFSTPNF DSQAKNISEV GVVKKSGSEP APKRTRNETP STLPAFKVRK  360
EKMGDRITAL QQLVSPFGKT DTASVLSEAI EYIKFLHEQV TVLSTPYMKS GAPTQNIQQN  420
SGKSKKSEGA KQDLRSRGLC LVPVSSTFPV THETTVDFWT PTFGGTSR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004487634.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150392e-42AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487634.10.0transcription factor bHLH123-like isoform X1
TrEMBLA0A1S2XFS20.0A0A1S2XFS2_CICAR; transcription factor bHLH123-like isoform X1
STRINGXP_004487634.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-67bHLH family protein