PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485664.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family GeBP
Protein Properties Length: 393aa    MW: 43421 Da    PI: 5.1651
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57373.73.3e-23182267195
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     klfqrl+seeDe+++L+ l df +kt+k+p +d  af+ fvkks++++++++q+ +K+rrLKkKf++           sf+k+hd+k+fel kk+
  XP_004485664.1 182 KLFQRLFSEEDELIILKNLADFISKTKKDPLKDHVAFHTFVKKSLHVDATSEQVKQKVRRLKKKFETSD---------SFTKPHDKKAFELYKKV 267
                     579**************************************************************8643.........68***********9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-20184267IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MAPKKQRPSP IDEPPTASSS SSSSEEDDDQ QPSSHQPEDE VEKSASSEEE DDEEEGSSED  60
EDEEDQPQPP SQPASKNPPP STPSLKTKPS SSSEYETGSE SDPEPTPPPN PKVKPLASKP  120
MKAQPLAQAQ STPVPARSGT KRAAENGNDS KRSKKKTSAV TTGGDSDDEM EAEPTTGEDS  180
KKLFQRLFSE EDELIILKNL ADFISKTKKD PLKDHVAFHT FVKKSLHVDA TSEQVKQKVR  240
RLKKKFETSD SFTKPHDKKA FELYKKVRGN KPNKAEENGK NLKSPNKEAS AKNGNEGPAK  300
KELATKKEPE KVVENSSLPL TEMFRFDSGV GLSGLNENVA KKGLELIENS KRVDLEDKWK  360
ELQIVEMELF LERAQLIRDQ TSALVKVQKK SSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485664.10.0PREDICTED: mediator-associated protein 1
TrEMBLG7IK181e-116G7IK18_MEDTR; DNA-binding storekeeper protein-related transcriptional regulator, putative
STRINGGLYMA13G32440.21e-55(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.11e-19DNA-binding storekeeper protein-related transcriptional regulator