PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g10800
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 235aa    MW: 26404.5 Da    PI: 9.1039
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g10800genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.6e-071772131555
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++ ++f  L  l+P +    ++K++Ka++L  A++Y+k+Lq
  CA11g10800 177 KLSQRFIALSALIPGL----KRKMDKASVLGDAIKYLKQLQ 213
                 78899**********9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.661162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-8172218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.29E-12175225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.57E-7176217No hitNo description
Gene3DG3DSA:4.10.280.101.9E-12176223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-5177213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MAYWFSFDEL SAISIASSFS ENTLHDSFIY RDHPIVGHKR PMELSQTVEE RPLKNPKTSH  60
SWNNNSSYHE NDQMSSSQSV AYPNYSHLIN SNNFTNQQVV TMKPKEETTL SCSSITFAAD  120
HHNNLVCHQD SFANQNYMFK KANNSCQGAN KSVSTNNGKL TQAQDDITVR GKDAKKKLSQ  180
RFIALSALIP GLKRKMDKAS VLGDAIKYLK QLQQSVKTLE EQTPKKSVES QCFS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016582322.11e-131PREDICTED: transcription factor bHLH18-like
TrEMBLA0A2G2YFQ31e-175A0A2G2YFQ3_CAPAN; Transcription factor bHLH18
STRINGPGSC0003DMT4000130741e-112(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-18bHLH family protein