PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g10230
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 404aa    MW: 44470.6 Da    PI: 8.3407
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g10230genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-174998255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  CA11g10230 49 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 98
                69*******.**********93....35999**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.5E-3449112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-2949105IPR001471AP2/ERF domain
CDDcd000186.04E-3049105No hitNo description
PfamPF008471.0E-104998IPR001471AP2/ERF domain
PROSITE profilePS5103222.08949106IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-2149106IPR016177DNA-binding domain
PRINTSPR003672.4E-95061IPR001471AP2/ERF domain
PRINTSPR003672.4E-97288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MEDAMRRLNQ ESDLPVQNSK NSSTLTKRSS CATNKRPVKD STSGSSAVRY RGVRRRPWGR  60
YAAEIRDPQS KERRWLGTFD TAEEAACAYD CAARAMRGVK ARTNFVYPPC PSPTQPTSTN  120
DFLNIPSFNY IKSSSSSHQY LGSTLKDLSN RPFFHSSSPY GSTVRGFNST IGSMCQKSNE  180
SLNMLLFREL LSSNSYSTNN ACSTIGNLNV TSTSMPNLYE QALPNFMFNR NVTSGPSLMP  240
TSDTVIPSSS VMTTHVPKFE NIIHSTVNTT TAAIDDSVGM EFFPSEPSDS GLLEEALNGF  300
FPKPKPIKSQ LILPNYSSTN VSTKGERLSN IFPHQQQHQI NEGLNSDFGF LSQTTSSPAS  360
SFPVYNQDYL PANLQVSPGD NMMGDIFQYP DLLSIFSAKL QNA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2044105971Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016552721.10.0PREDICTED: ethylene-responsive transcription factor ESR1-like
RefseqXP_016557500.10.0PREDICTED: ethylene-responsive transcription factor ESR1-like
TrEMBLA0A1U8F2550.0A0A1U8F255_CAPAN; Ethylene-responsive transcription factor LEP
TrEMBLA0A1U8FFL60.0A0A1U8FFL6_CAPAN; ethylene-responsive transcription factor ESR1-like
STRINGPGSC0003DMT4000478871e-161(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-13DORNROSCHEN-like