PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g02380
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 199aa    MW: 22981.5 Da    PI: 5.7865
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g02380genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.76.1e-1483141563
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 +++rr+++NRe+ArrsR RK+  ++eL   v  L +eN  L+++l++ ++  +k+ +e+
  CA11g02380  83 RKQRRMISNRESARRSRMRKQRHLDELWSQVLRLRTENNNLIDKLNHVSECHEKVLQEN 141
                 79***********************************************9999998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-1579143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.71481144IPR004827Basic-leucine zipper domain
PfamPF001701.0E-1183141IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-1183156No hitNo description
SuperFamilySSF579591.34E-1283132No hitNo description
CDDcd147023.92E-2084134No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MIPSEATATH YFASENPSPL PLDFNFMHNS LPSIQFSRYL TNVPNYPTSL HVHDFNNLPQ  60
SCISSNSTSD EADEQQLRIN DERKQRRMIS NRESARRSRM RKQRHLDELW SQVLRLRTEN  120
NNLIDKLNHV SECHEKVLQE NVQLKEEASD LRQMLTDLQF NSPFPDLCDL DDDVPCTTAH  180
LKAESSNLSI TYSTNLLH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195102RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016553291.11e-143PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC22e-38BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2G2YCG71e-142A0A2G2YCG7_CAPAN; Basic leucine zipper 43
STRINGXP_009611005.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.19e-46basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]