PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g19380
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 443aa    MW: 49850.8 Da    PI: 6.872
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g19380genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353e-11150187539
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39 
                 k  rr+++NReAAr+sR+RKka++++Le+   + ++Le
  CA10g19380 150 KTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLE 187
                 7789***********************96333555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.0E-8141194No hitNo description
SMARTSM003382.3E-7146206IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.749148192IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-7150185No hitNo description
PfamPF001702.2E-8150189IPR004827Basic-leucine zipper domain
PROSITE patternPS000360153168IPR004827Basic-leucine zipper domain
PfamPF141441.7E-28241316IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MENNNNHHHQ ISFGLFQQSP SSSSANPDEN FISKENGGAY DLGELDQALF LYLDGQDHPS  60
SSIQDQRQNN YGMRPPTLNI FPSQPMHIEP SSTKETIGLV SQSTTSGSKK TSQPSTDKTE  120
PPPKVPKREG SGKSPTSSQE QDAPKTPDPK TLRRLAQNRE AARKSRLRKK AYVQQLETSR  180
IRLAQLEHEI QRARSQGFHV GGNVLHGGDQ GFQINRTNIS SDAAAFNLEY ARWLEEHHKL  240
LCELRNAIFE EQLQEDELRI YVENCVAHYD NMMNFKGILA KSDVFHLVSG LWKSPAERCF  300
LWIGDFRPSE LLKIIVNQID ALTENQVLGL CALQQSTQEA EDVLSQGLEA LNQSVSDTII  360
ASDALIMGNN ENMGNYMALA INKLSTLEAY LRQADNLRHQ TIHRLHQSLT TRQAARCFLA  420
IGDYFHRLRA LSSLWLARPR HE*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754491e-95HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016543684.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotO241601e-113TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotQ415581e-113HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM1C6K40.0M1C6K4_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000608650.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.11e-156bZIP family protein