PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g07350
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 415aa    MW: 46054.3 Da    PI: 4.5126
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g07350genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573113.51.3e-35104204197
      DUF573   1 klfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                 klfqrlw++eDei lLqG++++++++g     s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ ++k+ sgke++f+++hdq +f++s ki
  CA10g07350 104 KLFQRLWTDEDEIELLQGFLEYTTQRGGinssSHHHDTTAFYDQIKSRLQLDFNKNQLVEKLRRLKKKYRNVMSKMGSGKEFVFKSSHDQATFDISCKI 202
                 579***********************9877644555*************************************************************** PP

      DUF573  96 Wg 97 
                 W 
  CA10g07350 203 WS 204
                 *6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.5E-33106204IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MASVEEDQHA VHNDDDLEDD EDDEEGGCPP QNEVVVDEDD DVDVDDDEDS TSTPPVPVSN  60
HFGSREVTIA VVGEPKRQRI NEFPVATTTV VEEKKPLAFD DSRKLFQRLW TDEDEIELLQ  120
GFLEYTTQRG GINSSSHHHD TTAFYDQIKS RLQLDFNKNQ LVEKLRRLKK KYRNVMSKMG  180
SGKEFVFKSS HDQATFDISC KIWSNTAPIV IRSSAPPPQE DGGFDDVDSH LNLNANFIDH  240
SPNINLNPNP DGIDVKTPKS RKRFRGGAVQ AEEKPGFIQQ YYQPSGGGTN VILPMSSSPA  300
LMPTPVPMAA PPLTATAASI PGLIEETVRS CLSPILKELL NNVTNLNGSR SFGFGIALGP  360
TPLGFGSSAV SSDMKLDEKW RKQQMLELEV YLRRLELVQD QIKAQLEELR SMTS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016545555.10.0PREDICTED: uncharacterized protein LOC107845638
TrEMBLA0A0V0I5T20.0A0A0V0I5T2_SOLCH; Putative mediator-associated protein 1-like
STRINGPGSC0003DMT4000092060.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40522445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.16e-66DNA-binding storekeeper protein-related transcriptional regulator