PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g14700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 518aa    MW: 59123 Da    PI: 5.0693
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g14700genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS151.67.2e-471505162373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL +  ea+++g++el++ ++  ++   +p g++++R+a+     L   + +++s           ++++s+   aa+k+f++v+P+ kf+h+taN+
  CA07g14700 150 HHLLAAYGEAMENGHKELVEVIIRSIKGKINPLGESLERVASN----LFLEIEDQGS---------YLRKESSKIIEAAFKVFYQVFPLGKFAHFTANS 235
                 7999999*********************************985....6777888222.........22222345555799******************* PP

        GRAS 101 aIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrl.edleleeL 194
                 aI eav  + ++v i+Dfd+++G+QWp++++a+ +R++    lR T +++ e++    + + +et++rL ++A+ +g++++ + ++ ++l ++l+  + 
  CA07g14700 236 AIIEAVPDDvKTVRIVDFDMGEGIQWPPIIEAMGQRRKA---LRFTSIKKTEEEstsFQWRFKETKRRLLDYANLFGLRLQVEEMTIEELaSELRRMK- 330
                 ******9999**************************776...******99887777667899*********************984443303333333. PP

        GRAS 195 rvkp....gEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpres. 279
                    +     E l+ n++++l ++  +   ++        +e+L +  s+   +v++ + ea  ns+    ++ + f + l yy ++f+sle  +p+   
  CA07g14700 331 ---KrgkgSEWLVFNCMFKLPHMGTRMCRIDAleflkLATELLLAKSSTHKGIVTFGDGEAMDNSHnadyTYSAFFNKYLIYYQSIFESLELCFPNYLa 426
                 ...34456***************97666666544443556666667778889********888877677799999*******************99877 PP

        GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                 ++r  +E  +l++++ +    +  e      ++++ +   +e G++  ++s+++  qak l+++ +   +rv    e+++++vl Wk+ +Lv vS W
  CA07g14700 427 QARLAMESLFLAPQVYSFSWIKIWE------EKRSVSYSCTEIGLQGKRVSKENLLQAKELVNERGTP-FRVRieeERQHEMVLEWKGTSLVRVSIW 516
                 ***************9987666666......455557889*************************955.66655467799***************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098524.572123495IPR005202Transcription factor GRAS
PfamPF035142.5E-44150516IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MQSELLHNSW CSTFHQTKFC GIQSDYENGK HGITYSSPNS KDQDSSGISF SDFTSQSFSD  60
FTSLFSDDDV LTDLPMDDSE FDDVCRWLND NESEENGNMN NISSAMKRDG DLWGPALSGV  120
SSELLSSTNR ATSLILPGNI GEMDSQMSLH HLLAAYGEAM ENGHKELVEV IIRSIKGKIN  180
PLGESLERVA SNLFLEIEDQ GSYLRKESSK IIEAAFKVFY QVFPLGKFAH FTANSAIIEA  240
VPDDVKTVRI VDFDMGEGIQ WPPIIEAMGQ RRKALRFTSI KKTEEESTSF QWRFKETKRR  300
LLDYANLFGL RLQVEEMTIE ELASELRRMK KRGKGSEWLV FNCMFKLPHM GTRMCRIDAL  360
EFLKLATELL LAKSSTHKGI VTFGDGEAMD NSHNADYTYS AFFNKYLIYY QSIFESLELC  420
FPNYLAQARL AMESLFLAPQ VYSFSWIKIW EEKRSVSYSC TEIGLQGKRV SKENLLQAKE  480
LVNERGTPFR VRIEEERQHE MVLEWKGTSL VRVSIWM*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579488.10.0PREDICTED: nodulation-signaling pathway 2 protein-like
TrEMBLA0A1U8HEA20.0A0A1U8HEA2_CAPAN; Uncharacterized protein
TrEMBLA0A2G2Z4G00.0A0A2G2Z4G0_CAPAN; nodulation-signaling pathway 2 protein-like
STRINGPGSC0003DMT4000685070.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53611938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-21GRAS family protein