PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g14430
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 308aa    MW: 34854.4 Da    PI: 6.8048
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g14430genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.38.2e-36221312108
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec....eaesssssasnsssgkaa 91 
                 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++     +     ++    e++++ + ++++s+  + 
  CA07g14430  22 TGRKDRHSKVYTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLDELppwnpN-----QVpsttEEADDAVLGQQQSEY-QL 114
                 79**************************************************************766541.....332222333333333323333.33 PP

         TCP  92 ksaakskksqksaasal 108
                 +++ ++++s+++ +s +
  CA07g14430 115 QKELEENNSSHQVNSSN 131
                 33333333333333222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.6E-3222132IPR005333Transcription factor, TCP
PROSITE profilePS5136931.9642482IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MKRATGGGEI VQVEGGHILR STGRKDRHSK VYTAKGPRDR RVRLAAHTAI QFYDVQDRLG  60
YDRPSKAVDW LIKKAKNAID KLDELPPWNP NQVPSTTEEA DDAVLGQQQS EYQLQKELEE  120
NNSSHQVNSS NSYMMQVPST GGEAPQSLGD TMKSFFPMNS GTPLMNFQNY PHEIMPRSSL  180
QNEDLGLSLH TTFHRATSSD NDQNALFSNH QNFEANYPRM ASWNILPQTF FTTQSAFTQR  240
EPLQSNFSQM INHHATWEER PLMNGLIHQA EITNNSRHFT TDFQVPARIH GEHHQDPSSA  300
SPNSHHH*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754460.0HG975446.1 Solanum pennellii chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016580868.10.0PREDICTED: transcription factor TCP4
SwissprotQ8LPR54e-54TCP4_ARATH; Transcription factor TCP4
TrEMBLM1AJX30.0M1AJX3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000243280.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.38e-51TCP family protein